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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015847674.1_cds_XP_016510145.1_23014
CDS Infomation

[gene=LOC107827511] [db_xref=GeneID:107827511] [protein=heparanase-like protein 2] [protein_id=XP_016510145.1] [location=complement(join(112731..113123,113865..113964,114101..114226,114353..114545,115478..115711,115820..115968,116530..116713,116903..116939,117067..117276))] [gbkey=CDS]
Sequence

ATGGACTTCCGAACCTTGTTGTTAATCTTTCTGGCGCTGTGTCCTGCATTTTCAGCGCAA
ACAGTTGAAGATACTGAACTTATGATTGATACATCTGTAAGAATTGCCTGGACAGATGAT
AATTATATTTGTGCTACCATTGATTGGTGGCCTAAAGAGAAGTGCAATTATAAGCAATGT
CCTTGGGACTTGGCATCTATTATAAATCTGGATTTATCTCACCCTTTTCTGGAAAATGCT
ATACGAGCTTTCAAGGGTTTGAGATTACGACTTGGAGGTTCTTTACAGGACCAAGTAATA
TATGATGTAGGCAACTTGAAATCTTCTTGCCATCCCTTCACCAAGCAGAAGGATGGGTTG
TTTGGATTCTCCAAGGGATGCTTACATATGCATAGATGGGATGAGTTAAACAACCTTTTC
AAGAAGACAGGAGCACTTGTGACTTTTGGTTTGAATGCGTTGTATGGGAGACGACGGATC
AATAGGCATGCATGGGGAGGAAATTGGGATTCCAGCAATGCCCGCGATTTCATGAAATAC
ACTGTTGCCAAAGGCTACCAGATACACTCATGGGAATTTGGAAATGAATTGAGTGGTCAG
GGAATTGGTGCAAGTGTTAATGCTGTACAGTACGGAAAAGATGTTATCCATCTGCACAAT
CTCATAGACCAAGTATACAAGAAATTTGACCAACGTCCTCTTCTATTAGCACCAGGAGGA
TTCTATAGTCCTGAGTGGTTCAGCAAGCTCCTTGAGGTTTCAGGGCCTGGCATAGTCAAC
ATCTTGACGCATCATATTTATAATCTTGGCCCAGGGTCCGAGGGAAGCAAGCTTGTAGAT
AAAATTTTAAATCCTCAATACTTGAATAAAATATCAGACACATTCGGCAATCTTACTCAA
ACCATTAAAATGAAGGGTCCTTGGGCTTCAGCTTGGGTTGGAGAATCTGGTGGAGCCTAC
AACAGTGGAGGTCCTAATGTGTCTAACGCCTTCGTAGATAGCTTTTGGTATTTAGATCAG
CTTGGGATAGCAGCCAAGCACCATACTAAAGTATACTGCCGACAGACTCTTATTGGAGGA
AATTATGGGCTCCTTGATACCAGCACGTTTGTTCCAAATCCTGATTATTATAGTGCACTT
CTTTGGCATAGACTGATGGGAAAAGAAGTTCTTGATATTAGCAGCAAAGCATCACCATAT
TTGCGCTCTTATGCCCATTGTACAAAAGATAGAGCTGGTGTGACTTTACTTCTGATCAAT
TTAAGCAACCAGATTCAGTATGGGGTCAACATCCAATCCAGTGCATATACCAGCTTGCAA
GTCGGTAAGAAAAAAAATCACAAGAAAAGTTCATTCGTGCACGGTCTTAAAGAAACTGTT
TCGTGGGTAGGAAGCAAATCATCAGATGTTACATTATATCGAGAAGAGTATCATCTAACT
CCAGAAGGCGGCAACCTTCAGAGCAGAACTATGCTCCTCAATGGGAAACCATTGCAACTC
ACAGAAACAGGAGATATTCCAAGTTTGTCTCCAGTTCTTGAAAATATCAAATCTCCAATA
TCAGTTGCACCATTGTCCATCAAGTTCATTGTATTCCCCAACTTTAATTCTCCTAGTTGT
AGATAA

Peptide Sequence

PEP ID

XP_016510145.1
PEP Infomation

PREDICTED: heparanase-like protein 2 [Nicotiana tabacum]
Sequence

MDFRTLLLIFLALCPAFSAQTVEDTELMIDTSVRIAWTDDNYICATIDWWPKEKCNYKQC
PWDLASIINLDLSHPFLENAIRAFKGLRLRLGGSLQDQVIYDVGNLKSSCHPFTKQKDGL
FGFSKGCLHMHRWDELNNLFKKTGALVTFGLNALYGRRRINRHAWGGNWDSSNARDFMKY
TVAKGYQIHSWEFGNELSGQGIGASVNAVQYGKDVIHLHNLIDQVYKKFDQRPLLLAPGG
FYSPEWFSKLLEVSGPGIVNILTHHIYNLGPGSEGSKLVDKILNPQYLNKISDTFGNLTQ
TIKMKGPWASAWVGESGGAYNSGGPNVSNAFVDSFWYLDQLGIAAKHHTKVYCRQTLIGG
NYGLLDTSTFVPNPDYYSALLWHRLMGKEVLDISSKASPYLRSYAHCTKDRAGVTLLLIN
LSNQIQYGVNIQSSAYTSLQVGKKKNHKKSSFVHGLKETVSWVGSKSSDVTLYREEYHLT
PEGGNLQSRTMLLNGKPLQLTETGDIPSLSPVLENIKSPISVAPLSIKFIVFPNFNSPSC
R

Transcript Sequence

Gene sequence data has not been registered.